Does Plan B work? Home range estimations from stored on board and transmitted data sets produced by GPS-telemetry in the Colombian Amazon / ¿Funciona el plan B? Estimación de rango de hogar a partir de datos almacenados en instrumentos a bordo de animales y los obtenidos a partir de telemetría satelital de GPS en el Amazonas colombiano

Abstract:Telemetry based on Global Positioning Systems (GPS) makes possible to gather large quantities of information in a very fine scale and work with species that were impossible to study in the past. When working with GPS telemetry, the option of storing data on board could be more desirable than the sole satellite transmitted data, due to the increase in the amount of locations available for analysis. Nonetheless, the uncertainty in the retrieving of the collar unit makes satellite-transmitted technologies something to take into account. Therefore, differences between store-on-board (SoB) and satellite-transmitted (IT) data sets need to be considered. Differences between SoB and IT data collected from two lowland tapirs (Tapirus terrestris), were explored by means of the calculation of home range areas by three different methods: the Minimum Convex Polygon (MCP), the Fixed Kernel Density Estimator (KDE) and the Brownian Bridges (BB). Results showed that SoB and IT data sets for the same individual were similar, with fix ranging from 63 % to 85 % respectively, and 16 m to 17 m horizontal errors. Depending on the total number of locations available for each individual, the home ranges estimated showed differences between 2.7 % and 79.3 %, for the 50 % probability contour and between 9.9 % and 61.8 % for the 95 % probability contour. These differences imply variations in the spatial coincidence of the estimated home ranges. We concluded that the use of IT data is not a good option for the estimation of home range areas if the collar settings have not been designed specifically for this use. Nonetheless, geographical representations of the IT based estimators could be of great help to identify areas of use, besides its assistance to locate the collar for its retrieval at the end of the field season and as a proximate backup when collars disappear. Rev. Biol. Trop. 64 (4): 1441-1450. Epub 2016 December 01.

Resumen:La telemetría basada en los sistemas de geopocisionamiento global (GPS) hace posible recopilar gran cantidad de información a escalas muy finas, y trabajar con especies imposibles de estudiar en el pasado. Al trabajar con telemetría de GPS, la opción de guardar información en la memoria interna del instrumento puede ser más deseable que sólo tener acceso a la información enviada vía satélite, debido a la mayor cantidad de localizaciones disponibles para analizar. No obstante, la incertidumbre de recuperar el collar hace que las tecnología de trasmisión vía satélite deba ser tenida en cuenta. Diferencias entre las bases de datos almacenadas en el collar (SoB) y las trasmitidas vía satélite (IT), recolectadas de dos individuos de Tapir de tierras bajas (Tapirus terrestris), son consideradas, en términos de las áreas de los rangos de hogar calculados con cada uno y mediante el uso de tres metodologías diferentes: Mínimo Polígono Convexo (MCP), Estimador de Densidad de Kernel Fijo (KDE) y los Puentes Brownianos (BB). Las bases de datos SoB e IT son similares, con tasas de acierto de localizaciones que oscilan entre 63 % to 85 % y errores horizontales de 16 m y 17 m respectivamente. Dependiendo del número total de localizaciones disponibles para cada individuo, los rangos de hogar estimados muestran diferencias entre 2.7 % y 79.3 %, para el contorno del 50 % de probabilidades, y entre 9.9 % y 61.8 % para el contorno del 95 % de probabilidades. Estas diferencias implican variaciones en la coincidencia espacial de los rangos de hogar estimados. Concluimos que el uso de la información trasmitida vía satélite no es una buena opción para la estimación de rangos de hogar, si la programción de los collares no ha sido diseñada específicamente para tal fin. Sin embargo, las representaciones geográficas de los estimados a partir de las bases de datos IT pueden ser de gran ayuda para la identificación de áreas de uso, además de su utilidad para la localización y recuperación de collares tras su liberación de los individuos monitoreados y como una base de datos de soporte en caso de pérdida del collar.

Application of hyperspectral remote sensing in field of medicinal plants monitoring research / 中国中药杂志

The paper introduces the basic concept and characteristics of hyperspectral remote sensing, and analyzed the application of hyperspectral remote sensing in the field of plants research. On the basis of the research advances of hyperspectral plant study, paper also analyzed the key facts that effects the application of hyperspectral remote sensing on the some researches which include distinguishing species,monitoring growth and quality etc. It proposed a new ideas and methods for people to research medicinal plants.

[Application of satellite remote sensing for tracking of arthropod vectors of diseases]

Arthropod-borne diseases are one of the major causes of human mortality. Since launch of the first meteorological satellites in 1960s, remote sensing has been increasingly implicated in the field of human health research and the data from satellites and their sensors with different spatial and temporal resolutions opened a new field of research in human health for scientists. Search engines and national/international scientific databanks were used to search keywords of remote sensing, satellite, tick, mosquito and sand fly and obtained articles were analyzed. Some ecological indices were used more in remote sensing of arthropod-borne diseases, including NDVI, SST, LST and CCD. Data of environmental factors such as temperature, relative humidity, land use/ land cover help us to detect the habitats of vectors of diseases regard to their ecology. However, the scope of applications, beyond theoretical large potentialities, appears limited both by their technical nature and the related models developed. The main problem for application of remote sensing in health science and epidemiology of diseases, is the costs of satellite images as well as the availability in the studied times to monitor a specific subject like vector or agent of the disease. Although the majority of health studies and diseases monitoring need to application of high spatial resolution images

Isla del Coco, on Cocos Plate, converges with Isla de San Andrés, on the Caribbean Plate, at 78mm/yr / La Isla del Coco, en la Placa de Cocos, converge con la Isla de San Andrés, en la Placa del Caribe, a 78 mm/año

Isla del Coco is the only land mass of the Cocos Plate that emerges above sea level. This makes it the only place where Cocos Plate motion can be measured using Global Navigation Satellite System (GNSS) monitoring. Global Positioning System (GPS) observations have been carried out sporadically over more than two decades on Isla del Coco, allowing precise measurement of the motion of the Cocos Plate. Recently, in May 2011, a continuous GPS station was built and instrumented at Isla del Coco, in Wafer Bay, by OVSICORI-UNA and UNAVCO, as part of the COCONet regional GNSS network. Position time series from this CGPS station (ISCO: Isla del Coco) show a steady motion of Isla del Coco at a speed of 90.9±1.5mm/yr in the N35oE direction in ITRF2008 and convergence with the Caribbean Plate at 78±1mm/yr. This result is consistent with the findings of the earliest GPS studies, and agrees within uncertainty with the estimated convergence rate of 76.4±x mm/ yr of the MORVEL plate motion model. MORVEL is based on an average over the last 780,000 years, and our result suggests that Cocos-Caribbean plate motions have been constant over that time interval.

La Isla del Coco es la única porción emergida en la placa del Coco. Esta condición la hace el único lugar donde se puede medir, usando Sistemas de Navegación Global por Satélite (GNSS), la velocidad de dicha placa. Las mediciones con GPS en la Isla del Coco se han realizado por más de dos décadas, permitiendo obtener velocidades precisas. En mayo del 2001 se instaló una estación continua de GPS en la Isla del Coco como parte, tanto de la Red Regional de GNSS COCONet, como del Sistema de Monitoreo Geodinámico de Nicoya (SISMOGENICO). Resultados de esta estación continua muestran movimiento continuo de la Isla del Coco, con respecto a ITRF2008, a una velocidad de 90.9±1.5mm/año con dirección N35oE y convergencia con la placa del Caribe a 78±1mm/año. Estas velocidades son consistentes con las obtenidas por MORVEL, un modelo geológico de velocidades de placas representativo de los últimos 780,000 años, y sugieren que la convergencia de estas placas se ha mantenido constante durante ese lapso de tiempo.

Massive bleaching of coral reefs induced by the 2010 ENSO, Puerto Cabello, Venezuela

El Niño Southern Oscillation (ENSO) has generated global coral massive bleaching. The aim of this work was to evaluate the massive bleaching of coral reefs in Puerto Cabello, Venezuela derived from ENSO 2010. We evaluated the bleaching of reefs at five localities both at three and five meter depth. The coral cover and densities of colonies were estimated. We recorded living coral cover, number and diameter of bleached and nonbleached colonies of each coral species. The colonies were classified according to the proportion of bleached area. Satellite images (Modis Scar) were analyzed for chlorophyll-a concentration and temperature in August, September, October and November from 2008-2010. Precipitation, wind speed and air temperature information was evaluated in meteorological data for 2009 and 2010. A total of 58.3% of colonies, belonging to 11 hexacoral species, were affected and the greatest responses were observed in Colpophyllia natans, Montastraea annularis and Montastraea faveolata. The most affected localities were closer to the mainland and had a bleached proportion up to 62.73±36.55%, with the highest proportion of affected colonies, whereas the farthest locality showed 20.25±14.00% bleached and the smallest proportion. The salinity in situ varied between 30 and 33ppm and high levels of turbidity were observed. According to the satellite images, in 2010 the surface water temperatura reached 31ºC in August, September and October, and resulted higher than those registered in 2008 and 2009. Regionally, chlorophyll values were higher in 2010 than in 2008 and 2009. The meteorological data indicated that precipitation in November 2010 was three times higher than in November 2009. Massive coral bleaching occurred due to a three month period of high temperatures followed by one month of intense ENSO-associated precipitation. However, this latter factor was likely the trigger because of the bleaching gradient observed. Rev. Biol. Trop. 60 (2): 527-538. Epub 2012 June 01.

El Niño ha generado blanqueamientos masivos en todo el mundo. El objetivo del estudio fue evaluar el blanqueamiento masivo de los arrecifes coralinos de Puerto Cabello, Venezuela debido al efecto del ENSO, 2010. En cada arrecife se seleccionaron dos profundidades: tres y cinco metros. Para determinar las concentraciones de clorofila-a y la temperatura en los meses de Agosto a Noviembre 2008 al 2010 se analizaron imágenes de satélite (tipo Modis Scar 1km2 de resolución). La precipitación, la velocidad del viento y la temperatura del aire fueron evaluadas según datos metereológicos del 2009 y 2010. La cobertura coralina y la densidad de colonias fue estimada, se anotó la cobertura de coral vivo de cada especie y el número y diámetro de colonias sanas y con blanqueamiento. Cada colonia fue clasificada según su área con blanqueamiento. Un 58.3% del total de las colonias fueron afectadas, estas pertenecen a 11 especies hexacoralinas. Las localidades con mayor afectación fueron las más cercanas al continente, la cuales presentaron una proporción de blanqueamiento de hasta 62.73±36.55% y un mayor porcentaje de colonias afectadas, mientras que la localidad más lejana presentó un 20.25±14.00% y una menor proporción de colonias afectadas, respectivamente. La salinidad registrada in situ varió entre 30 y 33ppm y se observó un alto nivel de turbidez. Según las imágenes de satélite, en el 2010 se observó una temperatura del agua de hasta 31ºC en los meses de agosto, septiembre y octubre. Los valores de clorofila fueron mayores en 2010 que en 2008 y 2009. Los datos meterorológicos indicaron que los valores de precipitación del 2010 triplicaron los del 2009. El blanqueamiento masivo fue la consecuencia de tres meses de altas temperaturas seguido de un mes de intensas precipitaciones asociadas al ENSO. Sin embargo, este último factor probablemente fue el detonante debido al gradiente observado.

evaluation of sea surface topography models based on the combination of the satellite altimetry and the global geoid models in the Persian Gulf

One of the difficulties in using absolute altitudes is the separation between the mean open sea level and geoid. Theoretically, geoid is the base level in absolute altitudes, but practically, the mean open sea level is used as a base level for absolute altitudes. The difference between these two levels is called as the sea surface topography. In this research, it is dealt the mean sea level modeling by using the observations of three altimeter satellites [i.e. Topex/Poseidon, Jason-1 and GFO] in Persian Gulf and then it is dealt with the evaluation of existing models of the sea surface topography based on the altimeter satellites data and the global geopotential geoid models [i.e. European Improved Gravity model of the Earth by New techniques, Gravity field and steady-state Ocean Circulation Explorer, Earth Gravitational Model 2008. The results of this research indicate that the sea surface topographical model resulting from the EIGEN06C geoid is the most precise model with changes range between -2.482 m and -1.511 m and mean -0.23 m

New tools for epidemiology: a space odyssey

Geographical Information Systems (GIS) facilitate access to epidemiological data through visualization and may be consulted for the development of mathematical models and analysis by spatial statistics. Variables such as land-cover, land-use, elevations, surface temperatures, rainfall etc. emanating from earth-observing satellites, complement GIS as this information allows the analysis of disease distribution based on environmental characteristics. The strength of this approach issues from the specific environmental requirements of those causative infectious agents, which depend on intermediate hosts for their transmission. The distribution of these diseases is restricted, both by the environmental requirements of their intermediate hosts/vectors and by the ambient temperature inside these hosts, which effectively govern the speed of maturation of the parasite. This paper discusses the current capabilities with regard to satellite data collection in terms of resolution (spatial, temporal and spectral) of the sensor instruments on board drawing attention to the utility of computer-based models of the Earth for epidemiological research. Virtual globes, available from Google and other commercial firms, are superior to conventional maps as they do not only show geographical and man-made features, but also allow instant import of data-sets of specific interest, e.g. environmental parameters, demographic information etc., from the Internet.

Application of digital earth technology in research of traditional Chinese medicine resources / 中国中药杂志

This paper describes the digital earth technology and its core technology-"3S" integration technology. The advance and promotion of the "3S" technology provide more favorable means and technical support for Chinese medicine resources survey, evaluation and appropriate zoning. Grid is a mature and popular technology that can connect all kinds of information resources. The author sums up the application of digital earth technology in the research of traditional Chinese medicine resources in recent years, and proposes the new method and technical route of investigation in traditional Chinese medicine resources, traditional Chinese medicine zoning and suitability assessment by combining the digital earth technology and grid.

The Estrada Real project and endemic diseases: the case of schistosomiasis, geoprocessing and tourism

Geographical Information System (GIS) is a tool that has recently been applied to better understand spatial disease distributions. Using meteorological, social, sanitation, mollusc distribution data and remote sensing variables, this study aimed to further develop the GIS technology by creating a model for the spatial distribution of schistosomiasis and to apply this model to an area with rural tourism in the Brazilian state of Minas Gerais (MG). The Estrada Real, covering about 1,400 km, is the largest and most important Brazilian tourism project, involving 163 cities in MG with different schistosomiasis prevalence rates. The model with three variables showed a R² = 0.34, with a standard deviation of risk estimated adequate for public health needs. The main variables selected for modelling were summer vegetation, summer minimal temperature and winter minimal temperature. The results confirmed the importance of Remote Sensing data and the valuable contribution of GIS in identifying priority areas for intervention in tourism regions which are endemic to schistosomiasis.

Spatial and temporal land cover changes in Terminos Lagoon Reserve, Mexico

Terminos Lagoon ecosystem is the largest fluvial-lagoon estuarine system in the country and one of the most important reserves of coastal flora and fauna in Mexico. Since the seventies, part of the main infrastructure for country’s oil extraction is located in this area. Its high biodiversity has motivated different type of studies including deforestation processes and land use planning. In this work we used satellite image analysis to determine land cover changes in the area from 1974 to 2001. Our results indicate that tropical forest and mangroves presented the most extensive losses in its coverage. In contrast, urban areas and induced grassland increased considerably. In 2001 more than half of the ecosystem area showed changes from its original land cover, and a third part of it was deteriorated. The main causes of deforestation were both the increase in grassland and the growth of urban areas. However, deforestation was attenuated by natural reforestation and plant canopy recovery. We conclude that the introduction of cattle and urban development were the main causes for the land cover changes; however, the oil industry activity located in the ecosystem, has promoted indirectly to urban growth and rancher boom. Rev. Biol. Trop. 58 (2): 565-575. Epub 2010 June 02.

El ecosistema de Laguna de Términos es el más grande sistema fluvio lagunar estuarino del país y una de las reservas más importantes de flora y fauna costera en México. Desde la década de los setentas, parte de la infraestructura necesaria para la explotación del petróleo en el país se encuentra localizada en esta área. Su importante biodiversidad ha motivado diferentes estudios en el área que incluyen procesos de deforestación y ordenamiento del territorio. Se realizó un análisis de imágenes de satélite para determinar los cambios de uso del suelo y vegetación en el área entre 1974 y 2001. Los resultados indican que la selva tropical y el mangle presentan las mayores pérdidas de cobertura. En contraste, las áreas urbanas y los pastos inducidos han incrementado considerablemente su extensión. En el año 2001 más de la mitad del área ocupada por el ecosistema mostró cambios en sus coberturas originales y una tercera parte estaba deteriorada. La deforestación fue causada principalmente por el incremento de los pastizales y el crecimiento de las áreas urbanas. Sin embargo, estas pérdidas fueron atenuadas por la regeneración natural. Se concluye que la introducción de pasto para la ganadería y el desarrollo urbano fueron las principales causas de los cambios de uso de suelo, sin embargo, la industria petrolera asentada en el ecosistema ha fomentado indirectamente el crecimiento urbano y el auge ganadero.

Marine habitats map of "Isla del Caño", Costa Rica, comparing Quickbird and Hymap images classification results

Isla del Caño is a marine protected area on the south Pacific coast of Costa Rica, surrounded by coral reefs and coral communities. The ecology of these coral reefs has been studied for over 20 years, but they have not been mapped. Maps are considered a great research, planning, management and monitoring tool. Medium to high resolution images (HyMap 2005 and Quickbird 2007 respectively) were processed and classified in order to test and compare their accuracy in producing a marine habitat map. Manta tow surveys were performed in the field for identification of 7 marine habitats 1. Coral community; 2. Coral reef; 3. Bed rock; 4. Sand; 5. Sand with boulders; 6. Sand with rodolyths; and 7. Deep water. The overall accuracy was slightly higher using Quickbird (87%) than using Hymap (60%), however the difference was not significant. The map produced using Quickbird was selected to represent the marine habitats of Isla del Caño. This map will help to analyze the adequate size and zoning of the marine protected area. Rev. Biol. Trop. 58 (1): 373-381. Epub 2010 March 01.

Isla del Caño es un área marina protegida en la costa del Pacífico de Costa Rica y está rodeada de arrecifes coralinos. La ecología de estos arrecifes coralinos ha sido estudiada a lo largo de 20 años pero todavía no habían sido mapeados. Los mapas son considerados una buena herramienta de investigación, planificación, manejo y monitoreo. Imágenes de mediana y alta resolución (Hymap 2005 y Quickbird 2007 respectivamente) fueron procesadas y clasificadas con el fin de evaluar y comparar su desempeño en la elaboración de un mapa de hábitats marinos. En el campo se realizaron sondeos tipo Manta para la identificación de siete hábitats marinos: 1. Comunidad coralina; 2. Arrecife coralino; 3. Roca; 4. Arena; 5. Arena con cantos; 6. Arena con rodolitos; y 7. Agua profunda. La exactitud de la clasificación resultó un poco mayor usando Quickbird (87%) que Hymap (60%), sin embargo la diferencia no era significativa. Se seleccionó el mapa resultante de la clasificación con Quickbird para representar los hábitats marinos de Isla del Caño. Este mapa puede ayudar a analizar el tamaño adecuado y la zonificación del área marina protegida.

The impact of water level changes on distribution of snails around lake areas reacted by thematic mapper images / 中华预防医学杂志

<p><b>OBJECTIVE</b>To study the impact of water level changes on the distribution of snails around lakes, and to study the possibility of forecasting the distribution of snails according to changes of water level reacted by remote sensing images.</p><p><b>METHODS</b>All information including water level information of Xingzi Hydrometric Station from 1997 to 2007, twelve TM images of Poyang Lake between 1998 and 2006 were collected. The water areas of Poyang Lake was extracted by MNDWI threshold approach, and the relationships between water areas from TM images and water level from Hydrometric Station was analyzed; Majiawan and Menqiantan marshland of Zhuxi village, Xingzi county was chosen as study pilot to set frames and investigate snails 2991 frames in 2007, and the information of snails of this pilot from 1998 to 2006 was collected to analyze the relationships between snails and water level.</p><p><b>RESULTS</b>The water areas of Poyang Lake extracted from Remote Sensing images from 1998 to 2006 was 1658.73 - 5873.48 km(2), and the corresponding daily water level of Xingzi Hydrometric Station was 9.96 - 21.72 m, according to correlation analysis, they were positive correlation relationship, the correlation coefficient was 0.96 (P < 0.01), and build a model: S = 5189.96 x ln(h) - 10 284.97; the percent of frames with living snail of zhuxi pilot from 1998 - 2007 was 28.33% - 77.46%, the corresponding monthly average water level of last August was 13.19 - 21.96 m, the corresponding highest water level of last year was 15.97 - 21.96 m, according to correlation analysis. The percent of frames with living snail of zhuxi pilot was negatively correlated with the corresponding monthly average water level of last August and the corresponding highest water level of last year, and the correlation coefficient was -0.69 (P < 0.05), and -0.77 (P < 0.01) respectively.</p><p><b>CONCLUSION</b>Water areas of Poyang Lake extracted from remote sensing images could well express the actual changes of water level, and the highest water level ahead of the year investigating snails influence the distribution of snails, thus we can estimate the distribution of snails around lakes by remote sensing images.</p>

Landscape structure and live fences in Andes Colombian agrosystems: upper basin of the Cane-Iguaque River

Changes in land use have generated a new landscape configuration in the Andino orobiome (mountain range) of the tropical Andes, resulting in a mosaic of cultivation and pastures interrupted by small fragments of forest and live fences. This has resulted in an ongoing decrease in the biodiversity of this biome. In the upper basin of the Cane-Iguaque River (Villa de Levya-Boyacá, Colombia), located 2 600-3 000 m above the Cordillera Oriental, over three time periods in 1960, 1984, and 2004, we characterized the structure, patterns, and evolution of the overall landscape and of the live fences (used as tools in biodiversity conservation and considered to be desirable alternatives to nonlive fences in farming production systems) within an agricultural landscape. To do this, we interpreted high- resolution satellite images using a landscape ecology approach and applied landscape map metrics. We found that the natural forests have been transformed by pastures and cultivation, and that although live fences cover only a small portion of the total landscape (4.6%), they have an important effect on landscape structure and biodiversity. There has been an increase in live fences, especially between 1960 and 1984, as well as an increase in their density. However, there has been a reduction in the average length of live fences over the periods that we studied. This could be due in part to changes in the types of agricultural products that have been cultivated in recent years, with an increase in potatoes and a decrease in other vegetables, and also by resource extraction of timber and fuel wood. In the studied area, agricultural production was sustained while biodiversity conservation was improved by the use of live fences. Therefore, live fences should be considered not only as part of an agriculturally productive area, but also as an important element of a multi-functional landscape that contributes to the maintenance of biodiversity and provides resources of economic and ecological interest, decreasing the pressure on natural forest. Improving the network of live fences constitutes an important strategy for the sustainable management of the rural landscape of the Andino orobiome of Colombia and similar areas in the tropics. Rev. Biol. Trop. 57 (4): 1183-1192. Epub 2009 December 01.

El cambio del uso del suelo ha generado una nueva configuración del paisaje en el Orobioma Andino de los Andes tropicales, dando lugar a un mosaico de cultivos y potreros interrumpidos por pequeños fragmentos de bosque y cercas vivas, con la disminución sobre la biodiversidad de este bioma. En la cuenca alta del río Cane- Iguaque (Boyaca-Colombia), ubicada entre 2 600-3 000 metros de altitud sobre la cordillera Oriental, se realizó un estudio de caracterización de estructura, patrones y evolución del paisaje y de las cercas vivas, en tres periodos 1960, 1984 y 2004, como herramienta para la conservación de la biodiversidad y alternativa en el manejo de los sistemas agrícolas. Se utilizó una metodología de interpretación de imágenes de satélite de alta resolución, bajo el enfoque de la ecología del paisaje y la utilización de métricas del paisaje. El bosque original esta altamente transformado por pastizales y cultivos, las cercas vivas ocupan apenas el 4.6% del área de estudio pero por su distribución se constituyen en elementos importantes para la biodiversidad. Se observa un incremento en las cercas vivas, entre los años 1960 y 1984. Sin embargo en este mismo período se da una disminución en la longitud, debido a la tendencia de aumento en el cultivo de papa y por la extracción de recursos de madera y leña. Para la zona de estudio es muy importante la producción agrícola y la conservación de la biodiversidad, y puede ser mejorada mediante la utilización de cercas vivas. Por tanto, las cercas deben considerarse como elementos multifuncionales del paisaje que contribuyen en el mantenimiento de la biodiversidad y aportan recursos de interés ecológico y económico, atenuando la presión sobre los bosques originales. El manejo adecuado y la mejora de la red de cercas vivas se constituyen en estrategias importantes para la gestión sostenible de paisaje rural de la zona andina colombiana.

Application of spatial technology in malaria research & control: some new insights.

Geographical information System (GIS) has emerged as the core of the spatial technology which integrates wide range of dataset available from different sources including Remote Sensing (RS) and Global Positioning System (GPS). Literature published during the decade (1998-2007) has been compiled and grouped into six categories according to the usage of the technology in malaria epidemiology. Different GIS modules like spatial data sources, mapping and geo-processing tools, distance calculation, digital elevation model (DEM), buffer zone and geo-statistical analysis have been investigated in detail, illustrated with examples as per the derived results. These GIS tools have contributed immensely in understanding the epidemiological processes of malaria and examples drawn have shown that GIS is now widely used for research and decision making in malaria control. Statistical data analysis currently is the most consistent and established set of tools to analyze spatial datasets. The desired future development of GIS is in line with the utilization of geo-statistical tools which combined with high quality data has capability to provide new insight into malaria epidemiology and the complexity of its transmission potential in endemic areas.

Urban expansion simulation using geospatial information system and artificial neural networks

Urban Expansion Model [UEM] was adapted to simulate urbanization which implements Geospatial Information Systems [GIS], Artificial Neural Networks [ANNs] and Remote Sensing [RS]. Two satellite imageries with specific time interval, socio-economic and environmental variables have been employed in order to simulate urban expansion. Socio-economic and environmental variables were used as inputs while construction and non-construction areas were used as outputs to train the neural network. Calibration of proposed model was performed with area under the ROC Curve [AROC] and Kappa Statistic [KS] which are non-shape performance metric. A real-life case study of Tehran Metropolitan Area [TMA] is presented to demonstrate the process. This paper presents a version of the UEM which parameterized for TMA and explores how factors such as road, building area, service centre, green space, elevation, aspect and slope can influence urbanization. Having urban expansion model with specific time interval and assuming the existence of the same rate of urbanization, new construction areas of region can be predicted. The overall accuracy of the model to predict new construction areas was 80% and 78% with AROC and KS, respectively

Establish remote of sensing monitoring method and standard on wild rare medical plant / 中国中药杂志

At present the shortage of the resources of wild and rare medicinal plants is very serious in China. So grasping the situation and change tendency of medicinal plant resources comprehensive and real-timely, is vital significance to realize the sustainable using of medicinal plant resources. In order to use the remote sensing monitor technology and method to study the resources of the wild and rare medicinal plants, this article discusses the principle, method, technology and the principle and standard based on the operation and experiment of remote sensing monitor on the resources of wild rare medicinal plant.

Proliferaciones algales 2000-2001 en Bahía de Banderas, México según el sensor SeaWiFS

Algal blooms at Banderas Bay, México (2000-2001), from SeaWiFS-sensor-data. Algal blooms for the period of 2000 and 2001 at Banderas Bay, México, were analyzed from SeaWiFS-ocean-color-sensor derived information. These events were related with the maximum chlorophyll week anomalies (ASi; a proxy variable constructed for the analysis of chlorophyll temporal variation in the bay). The winter-spring blooms were multispecific, while the summer-fall blooms were monospecific. Two proposals are made: 1) Winter-spring blooms are strongly related with mesoescale processes, due to their apparent temporal synchrony with the high chlorophyll levels in the coastal region from Sinaloa to Jalisco states; 2) Cochlodinium polykrikoides (Margalef 1961) blooms during the summer-fall periods could be induced by local conditions and the influence of previous events on the ecosystem. Rev. Biol. Trop. 56 (4): 1653-1664. Epub 2008 December 12.

Se analizaron las proliferaciones algales ocurridas en Bahía de Banderas, México, durante los años 2000 y 2001 a partir de información derivada del sensor de color del océano SeaWiFS. Estos eventos estuvieron relacionados con los máximos niveles de Anomalías Semanales de Clorofila’ (As i; variable construida para analizar la variación temporal de la clorofila dentro de la bahía). Las proliferaciones ocurridas en los periodos invierno-primavera fueron multiespecíficos, mientras que en verano-otoño fueron dominadas por una sola especie. Se plantean dos propuestas: 1) las proliferaciones algales de invierno-primavera están fuertemente relacionadas a procesos de mesoescala dada su aparente sincronía temporal con altos niveles de clorofila en las costas de Sinaloa a Jalisco; 2) mientras que las proliferaciones de Cochlodinium polykrikoides durante los periodos verano-otoño son favorecidas por el efecto de otras proliferaciones algales previas sobre el ecosistema y por condiciones predominantemente locales en la bahía.

Leishmaniose tegumentar americana em municípios da região noroeste do estado do Paraná: utilização de sensoriamento remoto para análise do tipo de vegetação e os locais de ocorrência da doença / American cutaneous leishmaniasis in municipalities in the northwestern region of Paraná State: use of remote sensing for analysis of vegetation types and places with disease occurrence

A leishmaniose tegumentar americana, doença endêmica da região noroeste do Paraná, é transmitida por flebotomíneos ao homem e a animais como cães, tatu, gambá e roedores silvestres. A doença vem ocorrendo em locais de derrubadas de matas e às margens de rios e lagoas com vegetação arbórea, onde o homem entra em contato com o inseto infectado. Esta doença constitui-se num problema de saúde pública devido à ocorrência de surtos epidêmicos em todo o Paraná. Em decorrência da importância de se conhecer áreas endêmicas, este trabalho utilizou dados de fichas epidemiológicas de pacientes atendidos no período de 1999 a 2004 associado às áreas de desmatamento identificadas por técnicas e produtos de sensoriamento remoto por satélite. Os resultados mostraram que a ocorrência de casos em municípios da região coincidem com as prováveis áreas supostas de infecção dos pacientes.

American cutaneous leishmaniasis, an endemic disease in the northwestern region of Paraná, Brazil, is transmitted by phlebotomines to man and animals like dogs, armadillos, opossums and wild rodents. This disease has been occurring in places where forests have been felled and on the banks of rivers and lakes with arboreal vegetation, where man comes into contact with infected insects. This disease is a public health problem because of the occurrence of epidemic outbreaks throughout Paraná. Because of the importance of finding out about endemic areas, this study used epidemiological file data on patients attended between 1999 and 2004. These data were correlated with areas of forest felling that were identified by means of satellite remote sensing techniques and products. The results showed that the occurrences of cases in the municipalities of this region coincided with the presumed likely areas for patient infection.

Distribution of a pelagic tunicate, Salpa fusiformis in warm surface current of the eastern Korean waters and its impingement on cooling water intakes of Uljin nuclear power plant.

Impingement of a large amount of gelatinous plankton, Salpa fusiformis on the seawater intake system-screens in a nuclear power plant at Uljin was firstly recorded on 18th June 2003. Whole amount of the clogged animals was estimated were presumptively at 295 tons and the shortage of cooling seawater supply by the animal clogging caused 38% of decrease in generation capability of the power plant. Zooplankton collection with a multiple towing net during the day and at night from 5 to 6 June 2003 included various gelatinous zooplanktons known to be warm water species such as salps and siphonophores. Comparatively larger species, Salpa fusiformis occupied 25.4% in individual density among the gelatinous plankton and showed surface distribution in the depth shallower than thermocline, performing little diel vertical migration. Temperature, salinity and satellite data also showed warm surface current predominated over the southern coastal region near the power plant in June. The results suggested that warm surface current occasionally extended into the neritic region may transfer S. fusiformis, to the waters off the power plant. The environmental factors and their relation to ecobiology of the large quantity of salpa population that are being sucked into the intake channel of the power plant are discussed.

Mapping tropical dry forest habitats integrating Landsat NDVI, Ikonos imagery, and topographic information in the Caribbean Island of Mona

Assessing the status of tropical dry forest habitats using remote sensing technologies is one of the research priorities for Neotropical forests. We developed a simple method for mapping vegetation and habitats in a tropical dry forest reserve, Mona Island, Puerto Rico, by integrating the Normalized Difference vegetation Index (NDvI) from Landsat, topographic information, and high-resolution Ikonos imagery. The method was practical for identifying vegetation types in areas with a great variety of plant communities and complex relief, and can be adapted to other dry forest habitats of the Caribbean Islands. NDvI was useful for identifying the distribution of forests, woodlands, and shrubland, providing a natural representation of the vegetation patterns on the island. The use of Ikonos imagery allowed increasing the number of land cover classes. As a result, sixteen land-cover types were mapped over the 5 500 ha area, with a kappa coefficient of accuracy equal to 79 %. This map is a central piece for modeling vertebrate species distribution and biodiversity patterns by the Puerto Rico Gap Analysis Project, and it is of great value for assisting research and management actions in the island. Rev. Biol. Trop. 56 (2): 625-639. Epub 2008 June 30.

El estudio y evaluación de los bosques tropicales secos mediante herramientas de teledetección es una de las prioridades de investigación en los ambientes neotropicales. Desarrollamos una metodología simple para mapear la vegetación de la isla de Mona, Puerto Rico, mediante el uso del índice de vegetación normalizado (NDVI por sus siglas en inglés) de Landsat, información topográfica, e imágenes auxiliares de alta resolución Ikonos. La metodología fue útil para identificar las clases de vegetación en un área de gran variedad de comunidades vegetales y relieve complejo, y puede ser adaptada a otras regiones de bosque seco de las islas del Caribe. El NDVI permitió identificar la distribución de los bosques cerrados, abiertos, y arbustos, proveyendo una representación natural de los patrones de vegetación en la isla. Las imágenes de Ikonos permitieron incrementar el número de clases detectadas. Como resultado, mapeamos 16 clases de cobertura del terreno en las 5 500 hectáreas de la isla de Mona, con un coeficiente de concordancia kappa de un 79%. La información obtenida en este estudio será utilizada para modelar la distribución de los vertebrados terrestres y patrones de biodiversidad en la isla, como parte del proyecto Gap Análisis de Puerto Rico, y es de gran valor para asistir en las actividades de investigación y manejo en la isla.